EURExpress - A Transcriptome Atlas Database for Mouse Embryo | Tool name | EURExpress - A Transcriptome Atlas Database for Mouse Embryo |
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| URL | http://www.eurexpress.org |
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| Important features | A genome-wide transcriptome atlas by RNA in situ hybridization for the developing mouse at embryonic day 14.5. It has anatomy-based expression profiles for many coding genes and microRNAs. The database identified many tissue-specific genes that are a source of novel tissue-specific markers for different anatomical structures. It helps in finding co-expression of genes, cell populations and lineages, and functional associations between genes relevant to development and disease. |
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| Citations | Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, NFCrnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Doll\E9 P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011 Jan 18;9(1):e1000582. PubMed PMID: 21267068; PubMed Central PMCID: PMC3022534. |
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| Year of publication | 2011 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | Other technique(s), Mouse |
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| Category | Online, Free |
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| Working status | Functional |
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| Other features | |
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| Other citations | Not available |
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